Sounds like you have the svchost.exe problem on your system, where for about 10 minutes or so it will cause your system to be almost completely unusable. Microsoft a few months ago had released a new version of Automatic Updates, which had a bug in it that used an excessive amount of RAM and CPU just for checking and installing updates. That has since been fixed by now. This only seems to be happening still on a few computers, as Microsoft released two patches for this problem a few months ago. My computers weren't affected, but unfortunately for one of my relatives whose computers I was updating, I ended up spending an extra hour there not for downloading, which only took a minute, but because svchost.exe was running at 100% usage whenever I tried searching for updates. They said that their computer also wasn't running too good at first when the svchost.exe process did the same thing, so I tried installing the two patches Microsoft released, that didn't help, so I had to kill the problem at the source, by shutting the Automatic Updates service off in Administrative Tools. Since I'm there a lot, I can take care of their computers and keep them updated since I pretty much prevented the service from even running anymore. So really, the only fixes I can think of is:
1: Rebuild the svchost.exe service for Automatic Updates
2: Try patching it
3: Going into control panel> Adminstrative Tools > Services and finding Automatic Updates and setting the service to run manually (note by doing this you are ultimately turning off Automatic Updates. If you wish to check your updates on
http://update.microsoft.com, you will need to set this back to Automatic).
4: If you wished to be hastled with it, every boot before the CPU usage occurs, go into Control Panel > Adminstrative Tools > Services and quickly shut down the Automatic Updates service.
5: Just wait it out whenever it decides to do that.
Otherwise, that's just everything else. In all seriousness, disable the service if patching it doesn't work, but note that you will not get updates automatically anymore, so you'll need to visit the Microsoft website the day after Patch Tuesday (second Tuesday of each month) to get those updates after re-enabling the service. This is not a very common problem that is happening anymore since Microsoft released a fix, and really only affected Windows XP. Windows 2000 and Vista surprisingly weren't bugged up over this.