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Are you missing files in your account? We can sort that from our backups (though that will overwrite everything I believe so if you made any changes you want to keep, download a copy of those files to be sure).it looks like a lot if not all the website pages were transferred or copied into other folders.. EXCEPT the HTML files that tell the pages what to do! So Who do I reach out to for help???
If there are missing files that fact in itself can cause issue.
The public_html you see in the root is just a shortcut, any folder with an bent arrow on usually is a shortcut (symbolic link), to the one located in domains/DOMAIN/ (and only works for the default domain if you have more of them). The actual public_html you see under domains need to have 755 as permissions (777 lets the world write to your files and is generally a bad idea).
I sorted the error for you by changing a couple errors in your .htaccess (they were spelling error and a missing space so I'm thinking you didn't use copy and paste for the code).